Molecular characterization of a ’Candidatus Phytoplasma asteris’‐related strain (16SrI‐B / cpn60UT I‐IB) affecting daisies (Argyranthemum spp.) in Mexico

Laura Jeannette García Barrera, Alejandra Chamorro-Flores, Stefani Aletse Meza Zamora, Diana Ortíz Gamino, Tim J. Dumonceaux, Edel Pérez López

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Abstract

From 2018 to 2019 symptoms consistent with infection by plant pathogenic phytoplasma bacteria were observed in commer- cial flower greenhouses located in Atlixco, Puebla, Mexico. Two varieties of Argyranthemum spp. plants exhibited symptoms of phyllody, causing serious concerns among farmers. To determine if phytoplasmas were associated with the symptomatic plants, the 16S rRNA-encoding locus (F2nR2 fragment) was amplified by PCR. This revealed that the symptomatic plants collected were infected by a phytoplasma belonging to the aster yellows group (16SrI-B). These results were confirmed and refined by amplification and sequencing of the phytoplasma chaperonin 60 universal target (cpn60 UT). Sequence analysis using the online tool CpnClassiPhyR confirmed that the phytoplasma detected is a member of the 16SrI group, specifically a member of the cpn60 UT I-IB subgroup.. This is the first report of daisies affected by phytoplasma in Mexico, and the first report of the use of CpnClassiPhyR to characterize an unknown phytoplasma strain. The detection of phytoplasmas infecting commercially produced daisies and their characterization provides an impetus for phytoplasma management in Atlixco, a Mexican city for which the production of ornamental plants and cut flowers is of economic importance.
Translated title of the contributionCaracterización molecular de una cepa relacionada con 'Candidatus Phytoplasma asteris' (16SrI-B / cpn60UT I-IB) que afecta a margaritas (Argyranthemum spp.) en México
Original languageEnglish
Article number2
Pages (from-to)1
Number of pages6
JournalAustralasian Plant Disease Notes
StatePublished - 20 Dec 2020

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