Full-genome sequencing and phylogenetic analysis of four neurovirulent Mexican isolates of porcine rubulavirus

Ali A. Garcia-Barrera; Alberto Del Valle; Juan A. Montaño-Hirose; Blanca Lilia Barrón; Juana Salinas-Trujano; Jesus Torres-Flores

doi:10.1007/s00705-017-3267-7

Full-genome sequencing and phylogenetic analysis of four neurovirulent Mexican isolates of porcine rubulavirus

Ali A. Garcia-Barrera, Alberto Del Valle, Juan A. Montaño-Hirose, Blanca Lilia Barrón, Juana Salinas-Trujano, Jesus Torres-Flores

Escuela Nacional de Ciencias Biológicas (ENCB)

Research output: Contribution to journal › Article › peer-review

3 Scopus citations

Abstract

We report the complete genome sequences of four neurovirulent isolates of porcine rubulavirus (PorPV) from 2015 and one historical PorPV isolate from 1984 obtained by next-generation sequencing. A phylogenetic tree constructed using the individual sequences of the complete HN genes of the 2015 isolates and other historical sequences deposited in the GenBank database revealed that several recent neurovirulent isolates of PorPV (2008-2015) cluster together in a separate clade. Phylogenetic analysis of the complete genome sequences revealed that the neurovirulent strains of PorPV that circulated in Mexico during 2015 are genetically different from the PorPV strains that circulated during the 1980s.

Original language	English
Pages (from-to)	1765-1768
Number of pages	4
Journal	Archives of Virology
Volume	162
Issue number	6
DOIs	https://doi.org/10.1007/s00705-017-3267-7
State	Published - 1 Jun 2017

Access to Document

10.1007/s00705-017-3267-7

Cite this

@article{edea70d2122e4c3290a99bb8da71b23c,

title = "Full-genome sequencing and phylogenetic analysis of four neurovirulent Mexican isolates of porcine rubulavirus",

abstract = "We report the complete genome sequences of four neurovirulent isolates of porcine rubulavirus (PorPV) from 2015 and one historical PorPV isolate from 1984 obtained by next-generation sequencing. A phylogenetic tree constructed using the individual sequences of the complete HN genes of the 2015 isolates and other historical sequences deposited in the GenBank database revealed that several recent neurovirulent isolates of PorPV (2008-2015) cluster together in a separate clade. Phylogenetic analysis of the complete genome sequences revealed that the neurovirulent strains of PorPV that circulated in Mexico during 2015 are genetically different from the PorPV strains that circulated during the 1980s.",

author = "Garcia-Barrera, {Ali A.} and {Del Valle}, Alberto and Monta{\~n}o-Hirose, {Juan A.} and Barr{\'o}n, {Blanca Lilia} and Juana Salinas-Trujano and Jesus Torres-Flores",

note = "Publisher Copyright: {\textcopyright} 2017, Springer-Verlag Wien.",

year = "2017",

month = jun,

day = "1",

doi = "10.1007/s00705-017-3267-7",

language = "Ingl{\'e}s",

volume = "162",

pages = "1765--1768",

journal = "Archives of Virology",

issn = "0304-8608",

number = "6",

}

TY - JOUR

T1 - Full-genome sequencing and phylogenetic analysis of four neurovirulent Mexican isolates of porcine rubulavirus

AU - Garcia-Barrera, Ali A.

AU - Del Valle, Alberto

AU - Montaño-Hirose, Juan A.

AU - Barrón, Blanca Lilia

AU - Salinas-Trujano, Juana

AU - Torres-Flores, Jesus

PY - 2017/6/1

Y1 - 2017/6/1

N2 - We report the complete genome sequences of four neurovirulent isolates of porcine rubulavirus (PorPV) from 2015 and one historical PorPV isolate from 1984 obtained by next-generation sequencing. A phylogenetic tree constructed using the individual sequences of the complete HN genes of the 2015 isolates and other historical sequences deposited in the GenBank database revealed that several recent neurovirulent isolates of PorPV (2008-2015) cluster together in a separate clade. Phylogenetic analysis of the complete genome sequences revealed that the neurovirulent strains of PorPV that circulated in Mexico during 2015 are genetically different from the PorPV strains that circulated during the 1980s.

AB - We report the complete genome sequences of four neurovirulent isolates of porcine rubulavirus (PorPV) from 2015 and one historical PorPV isolate from 1984 obtained by next-generation sequencing. A phylogenetic tree constructed using the individual sequences of the complete HN genes of the 2015 isolates and other historical sequences deposited in the GenBank database revealed that several recent neurovirulent isolates of PorPV (2008-2015) cluster together in a separate clade. Phylogenetic analysis of the complete genome sequences revealed that the neurovirulent strains of PorPV that circulated in Mexico during 2015 are genetically different from the PorPV strains that circulated during the 1980s.

UR - http://www.scopus.com/inward/record.url?scp=85011850792&partnerID=8YFLogxK

U2 - 10.1007/s00705-017-3267-7

DO - 10.1007/s00705-017-3267-7

M3 - Artículo

C2 - 28185101

SN - 0304-8608

VL - 162

SP - 1765

EP - 1768

JO - Archives of Virology

JF - Archives of Virology

IS - 6

ER -

Full-genome sequencing and phylogenetic analysis of four neurovirulent Mexican isolates of porcine rubulavirus

Abstract

Access to Document

Other files and links

Fingerprint

Cite this