TY - JOUR
T1 - Cupriavidus agavae sp. nov., a species isolated from agave l. rhizosphere in northeast Mexico
AU - Arroyo-Herrera, Ivan
AU - Maldonado-Hernández, Jessica
AU - Rojas-Rojas, Fernando Uriel
AU - Meza-Radilla, Georgina
AU - Larios-Serrato, Violeta
AU - Vásquez-Murrieta, María Soledad
AU - Whitman, William B.
AU - Los Santos, Paulina Estrada De
N1 - Publisher Copyright:
© 2020 The Authors.
PY - 2020
Y1 - 2020
N2 - During the isolation of bacteria from the Agave L. rhizosphere in northeast Mexico, four strains with similar BOX-PCR patterns were collected. The 16S rRNA gene sequences of all four strains were very similar to each other and that of the type strains of Cupriavidus metallidurans CH34T (98.49% sequence similarity) and Cupriavidus necator N-1T (98.35%). The genome of strain ASC-9842T was sequenced and compared to those of other Cupriavidus species. ANIb and ANIm values with the most closely related species were lower than 95%, while the in silico DNA–DNA hybridization values were also much lower than 70%, consistent with the proposal that they represent a novel species. This conclusion was supported by additional phenotypic and chemotaxonomic analyses. Therefore, the name Cupriavidus agavae sp. nov. is proposed with the type strain ASC-9842T (=LMG 26414T=CIP 110327T).
AB - During the isolation of bacteria from the Agave L. rhizosphere in northeast Mexico, four strains with similar BOX-PCR patterns were collected. The 16S rRNA gene sequences of all four strains were very similar to each other and that of the type strains of Cupriavidus metallidurans CH34T (98.49% sequence similarity) and Cupriavidus necator N-1T (98.35%). The genome of strain ASC-9842T was sequenced and compared to those of other Cupriavidus species. ANIb and ANIm values with the most closely related species were lower than 95%, while the in silico DNA–DNA hybridization values were also much lower than 70%, consistent with the proposal that they represent a novel species. This conclusion was supported by additional phenotypic and chemotaxonomic analyses. Therefore, the name Cupriavidus agavae sp. nov. is proposed with the type strain ASC-9842T (=LMG 26414T=CIP 110327T).
KW - Agave
KW - Cupriavidus
KW - Plant-associated
KW - Rhizosphere
UR - http://www.scopus.com/inward/record.url?scp=85088882011&partnerID=8YFLogxK
U2 - 10.1099/ijsem.0.004263
DO - 10.1099/ijsem.0.004263
M3 - Artículo
C2 - 32539928
AN - SCOPUS:85088882011
SN - 1466-5026
VL - 70
SP - 4165
EP - 4170
JO - International Journal of Systematic and Evolutionary Microbiology
JF - International Journal of Systematic and Evolutionary Microbiology
IS - 7
M1 - 004263
ER -